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- MBBS (Bachelor of Medicine & Bachelor of Surgery)
- BDS (Bachelor of Dental Surgery)
- BSc (Medical Laboratory Technology)
- BSc (Anaesthesia & Operation Theatre Technology)
- BSc (Medical Imaging Technology)
- BSc (Respiratory Therapy)
- BSc (Radiation Therapy Technology)
- BSc (Renal Dialysis Technology)
- BSc (Nursing)
- Post Basic BSc Nursing
- BPharm (Bachelor of Pharmacy)
- BPT (Bachelor of Physiotherapy)
- BSc (Honours) Biomedical Science
- BSc (Honors) Hotel Management
- B.Sc (Data Analytics)
- BASLP (Bachelor in Audiology & Speech Language Pathology)
- BTech (Bachelor of Technology) | Nitte Campus
- BTech (Bachelor of Technology) | Bengaluru Campus
- BArch (Bachelor of Architecture) | Mangaluru Campus
- BArch (Bachelor of Architecture) | Bengaluru Campus
- BCA | Nitte Campus
- BCA | Mangalore Campus
- BA (Honours) Media & Communication
- BCom (General) & (Professional)
- BBA | Nitte Campus
- BBA | Mangalore Campus
- Care of the Critically Ill Surgical Patients course (CCrISP)
- MD (Doctor of Medicine / MS - Master of Surgery)
- MDS (Master of Dental Surgery)
- MCh (Urology)
- MPH (Master of Public Health)
- MHAHSM (Hospital Administration & Health Systems Management)
- MSc (Anaesthesia & Operation Theatre Technology)
- MSc Audiology
- MSc Speech-Language Pathology
- MSc MLT (Haematology & Blood Transfusion)
- MSc MIT (Medical Imaging Technology)
- MSc RT (Respiratory Therapy)
- MSc (Clinical Embryology )
- MSc (Nursing)
- MSc Medical Surgical Nursing
- MSc Child Health Nursing
- MSc Mental Health Nursing
- MSc MSc Obstetrics & Gynaecology Nursing
- PharmD
- PharmD (Post Baccalaureate)
- MPharma (Master of Pharmacy)
- MPT (Master of Physiotherapy)
- MSc (Biomedical Science)
- MSc (Food Safety & Biotechnology)
- MSc (Biotechnology(CBCS))
- MSc (Microbiology)
- MSc (Cancer Biology)
- MSc (Marine Biotechnology)
- MTech | Nitte Campus
- MTech | Bengaluru Campus
- MBA (Master of Business Administration) | Nitte Campus
- MBA (Master of Business Administration) | Bengaluru Campus
- MCA(Master of Computer Applications) | Nitte Campus
- MCA(Master of Computer Applications) | Bengaluru Campus
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- K.S Hegde Medical Academy, Mangalore
- A.B Shetty Memorial Institute of Dental Sciences, Mangalore
- Nitte Usha Institute of Nursing Sciences, Mangalore
- Nitte Gulabi Shetty Memorial Institute of Pharmaceutical Sciences, Mangalore
- Nitte Institute of Physiotherapy
- Nitte Institute of Communication, Mangalore
- Nitte Institute of Speech & Hearing, Mangalore
- Nitte Institute of Architecture, Mangalore
- Nitte Centre for Science Education and Research, Mangalore
- Nitte Institute of Hospitality Services, Mangalore
- Justice K. S. Hegde Institute of Management, Nitte
- NMAM Institute of Technology, Nitte
- Dr. Nitte Shankara Adyanthaya Memorial First Grade College, Nitte
- General Medicine
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- Orthopaedics
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